genewise output Score 970.85 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00001973_2.0 3 WKSRCTPHRKTTXSAESYNEQGASEADIDSDSGYCSPKHNQAAGATNRT WK+R T R+ + ESYNEQGASEADIDSDSGYCSPKHNQA GAT RT WKNR-TKRRRASHPTESYNEQGASEADIDSDSGYCSPKHNQATGATQRT OMLM01004801.1:-7855 taac aaaacgtccagatagcggagggagagagttacacacgaggacca gaag cagggccaccagaaaagcgacatagaggaggcaaaaccgccagc ggca agaaaactatacctggactaatactcccctccaccgatgaaaaa SPP00001973_2.0 52 AENTAPSMV CVINVDDRPWVNVA A+NTA V WVNVA ADNTAAPTV H:C[tgt] --------TWVNVA OMLM01004801.1:-7711 ggaaggcagTGTTAGCT Intron 1 CAGGT atgagg caaccccct <1-----[7683 : 6788]-1> cgtatc actaaacgg ggatac SPP00001973_2.0 76 SQATPKTWGDRNGHFVRGDQR---------- SQATPK+W DRN F R DQR SQATPKSWVDRNSQFHRTDQRKNPEQRNISQ OMLM01004801.1:-6767 tcgacattggaaactcaagcaaacgcaaatc cacccacgtagagatagcaagaacaagatca tatcagcggcgctgccaacgggtcagaccag SPP00001973_2.0 97 LDNLPENSPINIVQTPIPITTSVPKR LDNLPENSPINIVQTPIPITTSVPKR LDNLPENSPINIVQTPIPITTSVPKR OMLM01004801.1:-6674 GTACAGT Intron 2 CAGcgaccgatcaaagcacacaaatgcaa <0-----[6674 : 4963]-0>taatcaacctattacctctccctcag atcgaacctcctggactctccttcgg SPP00001973_2.0 123 AKSQRKKALAAALATAQEYSEISMEQKKLQ AKSQRKKALAAALATAQEYSEISMEQKKLQ AKSQRKKALAAALATAQEYSEISMEQKKLQ OMLM01004801.1:-4884 gaacaaagcgggtgagcgttgaaagcaatc cagagaactccctcccaaacatgtaaaata cacggggtgttcgctaggttaccggggaag SPP00001973_2.0 153 EAFTKAAGKKSKTSVELDLGDMLAAL EAFTKAAGKKSKTSVELDLGDMLAAL EAFTKAAGKKSKTSVELDLGDMLAAL OMLM01004801.1:-4794 GTATGCC Intron 3 CAGggtaagggaaaaatggcgcggacggt <0-----[4794 : 4591]-0>actcaccgaagacctatatgattcct ggccgatggatacttggtgacggatg SPP00001973_2.0 179 EKQQQAMKARQLNNTKPVSFT GT EK QQAMKARQL NTKP+SFT GT EKHQQAMKARQLTNTKPLSFT L:V[gtt] GT OMLM01004801.1:-4512 gacccgaagaccaaaactttaGGTATCTG Intron 4 CAGTTga aaaaactacgatcacactctc <1-----[4448 : 4107]-1> gc gatggaggcaacctcaagata aa SPP00001973_2.0 203 TTPFYNSGSSSLPSMLRGHQQ-YSAPHNPLDSTAPRIKRGKEREIPKVK PF++S +LPSML+GHQQ YSAPHN LDSTAPRIKRGKEREIPKVK A-PFHSS--TNLPSMLKGHQQPYSAPHNALDSTAPRIKRGKEREIPKVK OMLM01004801.1:-4098 g ctcat aacctatagccccttgccagcgtagccaaagagagacaga c ctagc catccttagaaacacccaactaccccgtaggaagatcata t acccg ctggcgggttggacaaattcgtctattcgagagaactata SPP00001973_2.0 251 RPTALKK IILKEREGKKGKSSLEQES RPTALKK IILKEREGKKGK+S+EQES RPTALKK IILKEREGKKGKTSVEQES OMLM01004801.1:-3960 ccagcaaGTTAGTG Intron 5 TAGaacagcggaagaaaggcgt gccctaa<0-----[3939 : 3777]-0>tttaagagaagacgtaaac gaacggg tcggataggaggctaaagt SPP00001973_2.0 277 LGQEESGDECLHFTDDLSREPASQE GQEE GDECLHFTDDLSREPASQE SGQEEHGDECLHFTDDLSREPASQE E:E[gag] OMLM01004801.1:-3719 tgcggcgggtcctaggctcgcgtcgGGTGAGGG Intron 6 cgaaaagaagtatcaatcgacccaa <1-----[3643 : 3548] atgggtgtgtattttttaagtacaa SPP00001973_2.0 302 NGLSVASDASLSPASQNSPYSITPVSQGSPASSGIGSPMASNAI NGLSV SDASLSPASQNSPYSITPVSQGSPASSGIGSPMASNAI NGLSVPSDASLSPASQNSPYSITPVSQGSPASSGIGSPMASNAI OMLM01004801.1:-3550 CAGAGagcagcaggtctcgacatctaaacgtcgtcgatgagacagtaga -1> agtgtcgacctcccgaaccagtcctcagcccgcgtggctccact ttgcgctttctaactgccaccccaacgtttcctctgtcgtaccc SPP00001973_2.0 347 TKIHSRRFR YCNQVLSKEIDESV TKIHSRRFR YCNQVLSKEIDESV TKIHSRRFR E:E[gag] YCNQVLSKEIDESV OMLM01004801.1:-3413 aaacacctaGAGTAAGCA Intron 7 CAGGttacgtaagaggag catagggtg <2-----[3384 : 2061]-2> agaattgaataagt agctcgtta ctcaggtggctgcg SPP00001973_2.0 371 TLLLQELVRFQERVYQKDPSKAKSKRRLVMGLREVTKHMKLHKIKCVII TLLLQELVRFQERVYQKDP+KAKSKRRLVMGLREVTKHMKLHKIKCVII TLLLQELVRFQERVYQKDPTKAKSKRRLVMGLREVTKHMKLHKIKCVII OMLM01004801.1:-2017 acctcgcgctcgcgtcagcaagatacccgagcaggaacaatcaaatgaa ctttaattgtaagtaaaaccacacaggtttgtgatcaatataatagttt tggggagtctggagcggttggcacactgcgtcggcagcggatgcatcct SPP00001973_2.0 420 SPNCEKIQAK GLDEALYNVIAMA SPNCEKIQAK GLDEALYNVIAMA SPNCEKIQAK G:G[ggt] GLDEALYNVIAMA OMLM01004801.1:-1870 tcatgaacgaGGTAATAG Intron 8 CAGGTgtgggttagagag ccagaataca <1-----[1839 : 685]-1> gtaactaattctc tcctggcgaa cgtatactaccgc SPP00001973_2.0 444 REQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSGAE REQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSGAE REQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSGAE OMLM01004801.1: -643 cgcgactgtgtgaagcgctgaacgcgagggatattggg gaaatctttctggactgggtaattctgttgttaacgca ggggcgtgtcgcagttaacccaagtctgtctctttttg SPP00001973_2.0 482 GLFNQLVSLTEEARKAYKEMVSALEQ GLFN+LVSLTEEARKAYK+MVSALEQ GLFNRLVSLTEEARKAYKDMVSALEQ OMLM01004801.1: -529 GTAAGGC Intron 9 CAGgctactgtcagggaagtagagtgcgc <0-----[529 : 328]-0>gttagttctcaacgacaaattcctaa tccctagtgaagtggccgcggatgga SPP00001973_2.0 508 EQAEEALKHDKKVPHHMGHSRNHSAASAISFCSILSEPISEVNEKEY EQAEEALK+DKKVPHHMGHSRNHSAASAISFCSI SEPISEVNEKEY EQAEEALKNDKKVPHHMGHSRNHSAASAISFCSIFSEPISEVNEKEY OMLM01004801.1: -249 gcggggcaagaagcccagctcactggtgattttattgcatggagagt aacaactaaaaatcaatgacgaaccccctctgcttcactcataaaaa gatggtgatcgacaccgttctcctttttccctccctgactgctaggt // Making a C in phase 1 intron Making a V in phase 1 intron Making a E in phase 1 intron Making a E in phase 2 intron Making a G in phase 1 intron >OMLM01004801.1:subseq(0,38632).pep WKNRTKRRRASHPTESYNEQGASEADIDSDSGYCSPKHNQATGATQRTADNTAAPTVCTW VNVASQATPKSWVDRNSQFHRTDQRKNPEQRNISQLDNLPENSPINIVQTPIPITTSVPK RAKSQRKKALAAALATAQEYSEISMEQKKLQEAFTKAAGKKSKTSVELDLGDMLAALEKH QQAMKARQLTNTKPLSFTVGTAPFHSSTNLPSMLKGHQQPYSAPHNALDSTAPRIKRGKE REIPKVKRPTALKKIILKEREGKKGKTSVEQESSGQEEHGDECLHFTDDLSREPASQEEN GLSVPSDASLSPASQNSPYSITPVSQGSPASSGIGSPMASNAITKIHSRRFREYCNQVLS KEIDESVTLLLQELVRFQERVYQKDPTKAKSKRRLVMGLREVTKHMKLHKIKCVIISPNC EKIQAKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSGAEGL FNRLVSLTEEARKAYKDMVSALEQEQAEEALKNDKKVPHHMGHSRNHSAASAISFCSIFS EPISEVNEKEY // >OMLM01004801.1:subseq(0,38632).[7855:107].sp TGGAAGAACCGAACAAAGAGAAGACGAGCATCCCATCCAACTGAAAGCTACAATGAGCAG GGAGCCAGTGAAGCAGATATAGACAGTGACAGCGGCTACTGTAGCCCCAAACACAACCAG GCAACTGGGGCAACACAACGAACAGCAGACAATACAGCAGCACCCACGGTGTGTACGTGG GTAAATGTAGCCTCTCAAGCTACCCCAAAGTCCTGGGTGGACAGGAACAGTCAGTTCCAC AGAACAGACCAGAGGAAGAATCCCGAACAGAGAAACATCTCACAGCTAGATAACCTGCCA GAAAACTCCCCTATCAACATTGTGCAGACACCCATTCCCATTACCACCTCTGTTCCCAAG AGGGCCAAAAGCCAGAGGAAGAAGGCTCTGGCTGCTGCCTTGGCCACTGCACAGGAGTAT TCTGAAATCAGCATGGAGCAGAAGAAATTACAGGAGGCGTTCACCAAGGCAGCTGGGAAG AAAAGTAAAACCTCTGTTGAGCTGGATCTGGGAGACATGCTGGCAGCTTTGGAGAAACAT CAGCAGGCAATGAAGGCCAGACAACTCACCAATACCAAACCATTGTCATTTACAGTTGGA ACAGCTCCATTCCACAGCTCGACCAATCTGCCGTCCATGTTGAAGGGTCATCAGCAGCCA TACTCAGCACCACATAATGCCCTGGATTCCACTGCACCTCGTATCAAGAGAGGGAAAGAG AGAGAAATCCCTAAAGTTAAACGGCCAACAGCCCTGAAGAAGATTATCCTGAAGGAACGT GAAGGGAAGAAAGGGAAGACCAGTGTAGAACAAGAGTCTTCAGGTCAGGAGGAGCATGGG GATGAGTGTCTACATTTTACTGATGATCTTTCACGAGAGCCTGCATCCCAAGAAGAGAAT GGTCTGAGCGTGCCCAGTGATGCTTCCCTTTCACCAGCCAGTCAGAACTCCCCATACAGC ATCACCCCAGTATCCCAGGGTTCTCCTGCCAGCTCTGGCATTGGGAGTCCCATGGCTTCA AACGCCATCACAAAGATCCATAGCCGGCGTTTTAGAGAGTACTGTAACCAAGTGTTGAGT AAGGAGATCGATGAGAGCGTGACTCTGCTGTTGCAGGAACTGGTTCGCTTTCAGGAGCGA GTGTACCAGAAGGATCCTACGAAGGCCAAATCCAAACGCCGTCTGGTCATGGGTCTCAGG GAGGTCACAAAGCACATGAAGTTACATAAGATCAAATGTGTCATCATTTCTCCCAACTGT GAGAAGATCCAGGCAAAAGGTGGCTTGGATGAAGCTTTATACAATGTAATCGCCATGGCC CGGGAGCAGGAGATCCCGTTTGTGTTTGCCTTGGGCAGAAAGGCTCTTGGACGATGCGTC AACAAACTAGTGCCTGTCAGTGTGGTTGGCATTTTCAATTATTCTGGTGCTGAGGGTCTC TTCAACCGTTTAGTGTCTCTGACAGAAGAGGCTAGGAAGGCCTACAAGGACATGGTGTCA GCTCTGGAGCAAGAGCAAGCTGAGGAGGCTCTGAAAAATGACAAGAAAGTCCCACACCAC ATGGGTCATTCCCGTAACCACTCTGCTGCTTCTGCTATCTCCTTCTGTTCCATCTTCTCT GAGCCAATCTCTGAGGTCAATGAAAAGGAGTAT // OMLM01004801.1:subseq(0,38632) GeneWise match 7855 109 987.82 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 7855 7684 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 7683 6788 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 6787 6675 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 6674 4963 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 4962 4795 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 4794 4591 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 4590 4449 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 4448 4107 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 4106 3940 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 3939 3777 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 3776 3644 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 3643 3548 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 3547 3385 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 3384 2061 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 2060 1840 0.00 - 1 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 1839 685 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 684 530 0.00 - 2 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise intron 529 328 0.00 - . OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 OMLM01004801.1:subseq(0,38632) GeneWise cds 327 109 0.00 - 0 OMLM01004801.1:subseq(0,38632)-genewise-prediction-1 //